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nsv2787807

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:239,666

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 9527 SVs from 108 studies. See in: genome view    
Remapped(Score: Perfect):32,473,615-32,680,466Question Mark
Overlapping variant regions from other studies: 1242 SVs from 38 studies. See in: genome view    
Remapped(Score: Pass):3,858,983-3,972,325Question Mark
Overlapping variant regions from other studies: 1137 SVs from 38 studies. See in: genome view    
Remapped(Score: Pass):3,833,381-4,065,138Question Mark
Overlapping variant regions from other studies: 1323 SVs from 42 studies. See in: genome view    
Remapped(Score: Pass):3,824,251-4,063,916Question Mark
Overlapping variant regions from other studies: 9528 SVs from 108 studies. See in: genome view    
Remapped(Score: Perfect):32,441,392-32,648,243Question Mark
Overlapping variant regions from other studies: 1171 SVs from 36 studies. See in: genome view    
Remapped(Score: Pass):3,864,568-3,977,910Question Mark
Overlapping variant regions from other studies: 1414 SVs from 38 studies. See in: genome view    
Remapped(Score: Pass):3,832,679-4,064,436Question Mark
Overlapping variant regions from other studies: 1545 SVs from 40 studies. See in: genome view    
Remapped(Score: Pass):3,827,971-4,069,536Question Mark
Overlapping variant regions from other studies: 5940 SVs from 33 studies. See in: genome view    
Submitted genomic32,549,370-32,756,221Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2787807RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr632,473,61532,680,466
nsv2787807RemappedPassGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		3,858,9833,972,325
nsv2787807RemappedPassGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		3,833,3814,065,138
nsv2787807RemappedPassGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2		3,824,2514,063,916
nsv2787807RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr632,441,39232,648,243
nsv2787807RemappedPassGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		3,864,5683,977,910
nsv2787807RemappedPassGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		3,832,6794,064,436
nsv2787807RemappedPassGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		3,827,9714,069,536
nsv2787807Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr632,549,37032,756,221

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv13669999copy number lossCGPQ-2171SNP arrayGenotypingnssv13668106
nssv13670000copy number lossCGPQ-1353SNP arrayGenotyping8

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13669999RemappedPassNT_167246.2:g.(?_3
824251)_(4063916_?
)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		3,824,2514,063,916
nssv13670000RemappedPassNT_167246.2:g.(?_3
824251)_(4063916_?
)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		3,824,2514,063,916
nssv13669999RemappedPassNT_167249.2:g.(?_3
833381)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,833,3814,065,138
nssv13670000RemappedPassNT_167249.2:g.(?_3
833381)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,833,3814,065,138
nssv13669999RemappedPassNT_167247.2:g.(?_3
858983)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,858,9833,972,325
nssv13670000RemappedPassNT_167247.2:g.(?_3
858983)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,858,9833,972,325
nssv13669999RemappedPerfectNC_000006.12:g.(?_
32473615)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,473,61532,680,466
nssv13670000RemappedPerfectNC_000006.12:g.(?_
32473615)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,473,61532,680,466
nssv13669999RemappedPassNT_167246.1:g.(?_3
827971)_(4069536_?
)delNT_167246.1:g.
(?_3827971)_(40695
36_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		3,827,9714,069,536
nssv13670000RemappedPassNT_167246.1:g.(?_3
827971)_(4069536_?
)delNT_167246.1:g.
(?_3827971)_(40695
36_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		3,827,9714,069,536
nssv13669999RemappedPassNT_167249.1:g.(?_3
832679)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,832,6794,064,436
nssv13670000RemappedPassNT_167249.1:g.(?_3
832679)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,832,6794,064,436
nssv13669999RemappedPassNT_167247.1:g.(?_3
864568)_(3977910_?
)delNT_167247.1:g.
(?_3864568)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,864,5683,977,910
nssv13670000RemappedPassNT_167247.1:g.(?_3
864568)_(3977910_?
)delNT_167247.1:g.
(?_3864568)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,864,5683,977,910
nssv13669999RemappedPerfectNC_000006.11:g.(?_
32441392)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,441,39232,648,243
nssv13670000RemappedPerfectNC_000006.11:g.(?_
32441392)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,441,39232,648,243
nssv13669999Submitted genomicNC_000006.10:g.(?_
32549370)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,549,37032,756,221
nssv13670000Submitted genomicNC_000006.10:g.(?_
32549370)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,549,37032,756,221

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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