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dbVar

Database of genomic structural variation

nsv2788907

Organism: Homo sapiens

Study:nstd137 (Huddleston et al. 2016)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:11,792

Publication(s):Huddleston et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 295 SVs from 59 studies. See in: genome view

Submitted genomic37,170,797-37,182,588

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv2788907	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	37,170,797	37,182,588
nsv2788907	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	37,459,725	37,471,516

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv13679212	deletion	Sequencing	Genotyping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv13679212	Submitted genomic		NC_000010.11:g.371 70797_37182588del1 1792	GRCh38 (hg38)		NC_000010.11	Chr10	37,170,797	37,182,588
nssv13679212	Remapped	Perfect	NC_000010.10:g.374 59725_37471516del1 1792	GRCh37.p13	First Pass	NC_000010.10	Chr10	37,459,725	37,471,516

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv13679212	1	64	64

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