nsv2796482
- Organism: Homo sapiens
- Study:nstd137 (Huddleston et al. 2016)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,070
- Publication(s):Huddleston et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 278 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 278 SVs from 46 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv2796482 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000016.10 | Chr16 | 85,155,120 | 85,156,189 | ||
nsv2796482 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 85,188,726 | 85,189,795 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv13698296 | inversion | SAMN03255769 | Sequencing | Local sequence assembly | 46 |
nssv13707935 | inversion | SAMN02744161 | Sequencing | Local sequence assembly | 47 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv13698296 | Submitted genomic | NC_000016.10:g.851 55120_85156189inv | GRCh38 (hg38) | NC_000016.10 | Chr16 | 85,155,120 | 85,156,189 | ||
nssv13707935 | Submitted genomic | NC_000016.10:g.851 55120_85156189inv | GRCh38 (hg38) | NC_000016.10 | Chr16 | 85,155,120 | 85,156,189 | ||
nssv13698296 | Remapped | Perfect | NC_000016.9:g.8518 8726_85189795inv | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 85,188,726 | 85,189,795 |
nssv13707935 | Remapped | Perfect | NC_000016.9:g.8518 8726_85189795inv | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 85,188,726 | 85,189,795 |