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dbVar

Database of genomic structural variation

nsv2798394

Organism: Homo sapiens

Study:nstd137 (Huddleston et al. 2016)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,672

Publication(s):Huddleston et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 309 SVs from 35 studies. See in: genome view

Submitted genomic12,141,473-12,150,144

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv2798394	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	12,141,473	12,150,144
nsv2798394	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	12,141,472	12,150,143

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv13710502	inversion	SAMN03255769	Sequencing	Local sequence assembly	46

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv13710502	Submitted genomic		NC_000018.10:g.121 41473_12150144inv	GRCh38 (hg38)		NC_000018.10	Chr18	12,141,473	12,150,144
nssv13710502	Remapped	Perfect	NC_000018.9:g.1214 1472_12150143inv	GRCh37.p13	First Pass	NC_000018.9	Chr18	12,141,472	12,150,143

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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