nsv2802132
- Organism: Homo sapiens
- Study:nstd137 (Huddleston et al. 2016)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:559
- Publication(s):Huddleston et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 157 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 157 SVs from 38 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2802132 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 43,593,656 | 43,594,214 | ||
| nsv2802132 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 44,059,327 | 44,059,885 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv13697126 | inversion | SAMN02744161 | Sequencing | Local sequence assembly | 47 |
| nssv13708851 | inversion | SAMN03255769 | Sequencing | Local sequence assembly | 46 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv13697126 | Submitted genomic | NC_000001.11:g.435 93656_43594214inv | GRCh38 (hg38) | NC_000001.11 | Chr1 | 43,593,656 | 43,594,214 | ||
| nssv13708851 | Submitted genomic | NC_000001.11:g.435 93656_43594214inv | GRCh38 (hg38) | NC_000001.11 | Chr1 | 43,593,656 | 43,594,214 | ||
| nssv13697126 | Remapped | Perfect | NC_000001.10:g.440 59327_44059885inv | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 44,059,327 | 44,059,885 |
| nssv13708851 | Remapped | Perfect | NC_000001.10:g.440 59327_44059885inv | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 44,059,327 | 44,059,885 |