nsv2815476
- Organism: Homo sapiens
- Study:nstd137 (Huddleston et al. 2016)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,244
- Publication(s):Huddleston et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 159 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 42 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv2815476 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
nsv2815476 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv13698227 | inversion | SAMN02744161 | Sequencing | Local sequence assembly | 47 |
nssv13698948 | inversion | SAMN03255769 | Sequencing | Local sequence assembly | 46 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv13698227 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
nssv13698948 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
nssv13698227 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in v | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
nssv13698948 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in v | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |