nsv290
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:25,891
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 357 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 357 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 15 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv290 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 160,590,042 | 160,615,932 |
| nsv290 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 161,011,074 | 161,036,964 |
| nsv290 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 160,981,485 | 161,007,375 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv290 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv290 | Remapped | Perfect | NC_000006.12:g.(16 0590042_?)_(?_1606 15932)ins14106 | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 160,590,042 | 160,615,932 |
| nssv290 | Remapped | Perfect | NC_000006.11:g.(16 1011074_?)_(?_1610 36964)ins14106 | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 161,011,074 | 161,036,964 |
| nssv290 | Submitted genomic | NC_000006.9:g.(160 981485_?)_(?_16100 7375)ins14106 | NCBI35 (hg17) | NC_000006.9 | Chr6 | 160,981,485 | 161,007,375 |