Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3049937

Organism: Homo sapiens

Study:nstd140 (Fan et al. 2017)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,785

Publication(s):Fan et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 318 SVs from 63 studies. See in: genome view

Submitted genomic118,051,407-118,058,191

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3049937	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	118,051,407	118,058,191
nsv3049937	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	117,387,102	117,393,886

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14020722	deletion	NA12878	Sequencing	Local sequence assembly	15,093

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14020722	Submitted genomic		NC_000005.10:g.118 051407_118058191de l	GRCh38 (hg38)		NC_000005.10	Chr5	118,051,407	118,058,191
nssv14020722	Remapped	Perfect	NC_000005.9:g.1173 87102_117393886del	GRCh37.p13	First Pass	NC_000005.9	Chr5	117,387,102	117,393,886

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI