nsv3066891
- Organism: Homo sapiens
- Study:nstd140 (Fan et al. 2017)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant is Defined by:KY429424
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Fan et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 148 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 6 SVs from 5 studies. See in: genome view
Overlapping variant regions from other studies: 148 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3066891 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 154,157,049 | 154,157,049 |
| nsv3066891 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_017363814.1 | Chr4|NW_01 7363814.1 | 84,690 | 84,690 |
| nsv3066891 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 155,078,201 | 155,078,201 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14036760 | insertion | CHM1 | Sequencing | Local sequence assembly | 7,551 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14036760 | Remapped | Perfect | NW_017363814.1:g.8 4690_84691ins? | GRCh38.p12 | Second Pass | NW_017363814.1 | Chr4|NW_01 7363814.1 | 84,690 | 84,690 |
| nssv14036760 | Remapped | Perfect | NC_000004.12:g.154 157049_154157050in s? | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 154,157,049 | 154,157,049 |
| nssv14036760 | Submitted genomic | NC_000004.11:g.155 078201_155078202in s? | GRCh37 (hg19) | NC_000004.11 | Chr4 | 155,078,201 | 155,078,201 |