nsv3067120
- Organism: Homo sapiens
- Study:nstd142 (Rahbari et al. 2017)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,139
- Description:
NC_000001.9:g.159806619_159815757con159888461_159897571 - Publication(s):Rahbari et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 524 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 528 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 219 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3067120 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 161,570,205 | 161,579,343 |
| nsv3067120 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 161,539,995 | 161,549,133 |
| nsv3067120 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 159,806,619 | 159,815,757 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14038722 | sequence alteration | NA12156 | Sequencing | Sequence alignment | |
| nssv14038723 | sequence alteration | NA18507 | Sequencing | Sequence alignment | |
| nssv14038724 | sequence alteration | NA19129 | Sequencing | Sequence alignment | nssv14038726 |
| nssv14038725 | sequence alteration | NA18956 | Sequencing | Sequence alignment | nssv14038728 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv14038722 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 161,570,205 | 161,579,343 |
| nssv14038723 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 161,570,205 | 161,579,343 |
| nssv14038724 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 161,570,205 | 161,579,343 |
| nssv14038725 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 161,570,205 | 161,579,343 |
| nssv14038722 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 161,539,995 | 161,549,133 |
| nssv14038723 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 161,539,995 | 161,549,133 |
| nssv14038724 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 161,539,995 | 161,549,133 |
| nssv14038725 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 161,539,995 | 161,549,133 |
| nssv14038722 | Submitted genomic | NCBI36 (hg18) | NC_000001.9 | Chr1 | 159,806,619 | 159,815,757 | ||
| nssv14038723 | Submitted genomic | NCBI36 (hg18) | NC_000001.9 | Chr1 | 159,806,619 | 159,815,757 | ||
| nssv14038724 | Submitted genomic | NCBI36 (hg18) | NC_000001.9 | Chr1 | 159,806,619 | 159,815,757 | ||
| nssv14038725 | Submitted genomic | NCBI36 (hg18) | NC_000001.9 | Chr1 | 159,806,619 | 159,815,757 |