nsv31
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:60,146
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 343 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 329 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 13 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv31 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | - | 85,764,664 | 85,824,809 | - |
| nsv31 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 86,775,575 | - | - | 86,823,583 |
| nsv31 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000008.9 | Chr8 | 86,860,428 | - | - | 86,892,874 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv31 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv31 | Remapped | Pass | NC_000008.11:g.(?_ 85764664)_(8582480 9_?)inv | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | - | 85,764,664 | 85,824,809 | - |
| nssv31 | Remapped | Pass | NC_000008.10:g.(86 775575_?)_(?_86823 583)inv | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 86,775,575 | - | - | 86,823,583 |
| nssv31 | Submitted genomic | NC_000008.9:g.(868 60428_?)_(?_868928 74)inv | NCBI35 (hg17) | NC_000008.9 | Chr8 | 86,860,428 | - | - | 86,892,874 |