nsv3110194
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:14,310
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 423 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 423 SVs from 73 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3110194 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 15,140,514 | 15,154,823 |
| nsv3110194 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 15,043,831 | 15,058,140 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14098673 | deletion | sample400 | Oligo aCGH | Probe signal intensity | 92 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14098673 | Remapped | Perfect | NC_000017.11:g.(?_ 15140514)_(1515482 3_?)del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 15,140,514 | 15,154,823 |
| nssv14098673 | Submitted genomic | NC_000017.10:g.(?_ 15043831)_(1505814 0_?)del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 15,043,831 | 15,058,140 |