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dbVar

Database of genomic structural variation

nsv3110207

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:8,561

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 198 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):121,838,090-121,846,650

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3110207	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	121,838,090	121,846,650
nsv3110207	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	122,159,236	122,167,796

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14083563	deletion	sample34	Oligo aCGH	Probe signal intensity	71
nssv14084450	deletion	sample92	Oligo aCGH	Probe signal intensity	53
nssv14087651	deletion	sample205	Oligo aCGH	Probe signal intensity	48
nssv14089249	deletion	sample293	Oligo aCGH	Probe signal intensity	64

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14083563	Remapped	Perfect	NC_000006.12:g.(?_ 121838090)_(121846 650_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	121,838,090	121,846,650
nssv14084450	Remapped	Perfect	NC_000006.12:g.(?_ 121838090)_(121846 650_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	121,838,090	121,846,650
nssv14087651	Remapped	Perfect	NC_000006.12:g.(?_ 121838090)_(121846 650_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	121,838,090	121,846,650
nssv14089249	Remapped	Perfect	NC_000006.12:g.(?_ 121838090)_(121846 650_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	121,838,090	121,846,650
nssv14083563	Submitted genomic		NC_000006.11:g.(?_ 122159236)_(122167 796_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	122,159,236	122,167,796
nssv14084450	Submitted genomic		NC_000006.11:g.(?_ 122159236)_(122167 796_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	122,159,236	122,167,796
nssv14087651	Submitted genomic		NC_000006.11:g.(?_ 122159236)_(122167 796_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	122,159,236	122,167,796
nssv14089249	Submitted genomic		NC_000006.11:g.(?_ 122159236)_(122167 796_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	122,159,236	122,167,796

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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