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dbVar

Database of genomic structural variation

nsv3110446

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:3,608

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 183 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):80,430,891-80,434,498

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3110446	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nsv3110446	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	80,824,671	80,828,278

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14091508	deletion	sample53	Oligo aCGH	Probe signal intensity	59
nssv14091603	deletion	sample81	Oligo aCGH	Probe signal intensity	106
nssv14091637	deletion	sample88	Oligo aCGH	Probe signal intensity	71
nssv14092476	deletion	sample259	Oligo aCGH	Probe signal intensity	86
nssv14092615	deletion	sample304	Oligo aCGH	Probe signal intensity	87
nssv14092660	deletion	sample316	Oligo aCGH	Probe signal intensity	83
nssv14093764	deletion	sample359	Oligo aCGH	Probe signal intensity	103

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14091508	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14091603	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14091637	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14092476	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14092615	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14092660	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14093764	Remapped	Perfect	NC_000012.12:g.(?_ 80430891)_(8043449 8_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	80,430,891	80,434,498
nssv14091508	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14091603	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14091637	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14092476	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14092615	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14092660	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278
nssv14093764	Submitted genomic		NC_000012.11:g.(?_ 80824671)_(8082827 8_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	80,824,671	80,828,278

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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