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dbVar

Database of genomic structural variation

nsv3110642

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:4,866

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 164 SVs from 32 studies. See in: genome view

Remapped(Score: Perfect):35,823,688-35,828,553

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3110642	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	35,823,688	35,828,553
nsv3110642	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	36,397,825	36,402,690

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14094573	deletion	sample138	Oligo aCGH	Probe signal intensity	112
nssv14095726	deletion	sample210	Oligo aCGH	Probe signal intensity	58

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14094573	Remapped	Perfect	NC_000013.11:g.(?_ 35823688)_(3582855 3_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	35,823,688	35,828,553
nssv14095726	Remapped	Perfect	NC_000013.11:g.(?_ 35823688)_(3582855 3_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	35,823,688	35,828,553
nssv14094573	Submitted genomic		NC_000013.10:g.(?_ 36397825)_(3640269 0_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	36,397,825	36,402,690
nssv14095726	Submitted genomic		NC_000013.10:g.(?_ 36397825)_(3640269 0_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	36,397,825	36,402,690

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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