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dbVar

Database of genomic structural variation

nsv3110854

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:11,824

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 279 SVs from 69 studies. See in: genome view

Remapped(Score: Perfect):91,401,358-91,413,181

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3110854	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	91,401,358	91,413,181
nsv3110854	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	91,030,673	91,042,496

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14083358	deletion	sample91	Oligo aCGH	Probe signal intensity	90
nssv14084088	deletion	sample19	Oligo aCGH	Probe signal intensity	101
nssv14084309	deletion	sample148	Oligo aCGH	Probe signal intensity	80
nssv14084935	deletion	sample387	Oligo aCGH	Probe signal intensity	78

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14083358	Remapped	Perfect	NC_000007.14:g.(?_ 91401358)_(9141318 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,401,358	91,413,181
nssv14084088	Remapped	Perfect	NC_000007.14:g.(?_ 91401358)_(9141318 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,401,358	91,413,181
nssv14084309	Remapped	Perfect	NC_000007.14:g.(?_ 91401358)_(9141318 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,401,358	91,413,181
nssv14084935	Remapped	Perfect	NC_000007.14:g.(?_ 91401358)_(9141318 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,401,358	91,413,181
nssv14083358	Submitted genomic		NC_000007.13:g.(?_ 91030673)_(9104249 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,030,673	91,042,496
nssv14084088	Submitted genomic		NC_000007.13:g.(?_ 91030673)_(9104249 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,030,673	91,042,496
nssv14084309	Submitted genomic		NC_000007.13:g.(?_ 91030673)_(9104249 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,030,673	91,042,496
nssv14084935	Submitted genomic		NC_000007.13:g.(?_ 91030673)_(9104249 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,030,673	91,042,496

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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