Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3111074

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:4,699

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 105 SVs from 28 studies. See in: genome view

Remapped(Score: Perfect):18,743,830-18,748,528

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3111074	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	18,743,830	18,748,528
nsv3111074	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	19,032,759	19,037,457

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14089070	deletion	sample83	Oligo aCGH	Probe signal intensity	88
nssv14089841	deletion	sample367	Oligo aCGH	Probe signal intensity	31

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14089070	Remapped	Perfect	NC_000010.11:g.(?_ 18743830)_(1874852 8_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	18,743,830	18,748,528
nssv14089841	Remapped	Perfect	NC_000010.11:g.(?_ 18743830)_(1874852 8_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	18,743,830	18,748,528
nssv14089070	Submitted genomic		NC_000010.10:g.(?_ 19032759)_(1903745 7_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	19,032,759	19,037,457
nssv14089841	Submitted genomic		NC_000010.10:g.(?_ 19032759)_(1903745 7_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	19,032,759	19,037,457

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI