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dbVar

Database of genomic structural variation

nsv3111376

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:7,372

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 263 SVs from 68 studies. See in: genome view

Remapped(Score: Perfect):91,404,270-91,411,641

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3111376	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	91,404,270	91,411,641
nsv3111376	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	91,033,585	91,040,956

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14083389	deletion	sample97	Oligo aCGH	Probe signal intensity	80
nssv14085066	deletion	sample173	Oligo aCGH	Probe signal intensity	82

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14083389	Remapped	Perfect	NC_000007.14:g.(?_ 91404270)_(9141164 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,404,270	91,411,641
nssv14085066	Remapped	Perfect	NC_000007.14:g.(?_ 91404270)_(9141164 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,404,270	91,411,641
nssv14083389	Submitted genomic		NC_000007.13:g.(?_ 91033585)_(9104095 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,033,585	91,040,956
nssv14085066	Submitted genomic		NC_000007.13:g.(?_ 91033585)_(9104095 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	91,033,585	91,040,956

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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