nsv3112195
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:104,940
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5346 SVs from 102 studies. See in: genome view
Overlapping variant regions from other studies: 5347 SVs from 102 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3112195 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 32,561,883 | 32,666,822 |
| nsv3112195 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 32,529,660 | 32,634,599 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14083837 | deletion | sample389 | Oligo aCGH | Probe signal intensity | 21 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14083837 | Remapped | Perfect | NC_000006.12:g.(?_ 32561883)_(3266682 2_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 32,561,883 | 32,666,822 |
| nssv14083837 | Submitted genomic | NC_000006.11:g.(?_ 32529660)_(3263459 9_?)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 32,529,660 | 32,634,599 |