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dbVar

Database of genomic structural variation

nsv3112451

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:4,316

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 477 SVs from 35 studies. See in: genome view

Remapped(Score: Perfect):76,489,690-76,494,005

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3112451	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	76,489,690	76,494,005
nsv3112451	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000018.9	Chr18	74,201,646	74,205,961

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14100014	deletion	sample193	Oligo aCGH	Probe signal intensity	31
nssv14100299	deletion	sample385	Oligo aCGH	Probe signal intensity	65

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14100014	Remapped	Perfect	NC_000018.10:g.(?_ 76489690)_(7649400 5_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,489,690	76,494,005
nssv14100299	Remapped	Perfect	NC_000018.10:g.(?_ 76489690)_(7649400 5_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	76,489,690	76,494,005
nssv14100014	Submitted genomic		NC_000018.9:g.(?_7 4201646)_(74205961 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	74,201,646	74,205,961
nssv14100299	Submitted genomic		NC_000018.9:g.(?_7 4201646)_(74205961 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	74,201,646	74,205,961

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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