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dbVar

Database of genomic structural variation

nsv3113252

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:4,331

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 401 SVs from 63 studies. See in: genome view

Remapped(Score: Perfect):40,917,352-40,921,682

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3113252	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	40,917,352	40,921,682
nsv3113252	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	40,774,871	40,779,201

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14085313	deletion	sample170	Oligo aCGH	Probe signal intensity	62
nssv14085991	deletion	sample189	Oligo aCGH	Probe signal intensity	59

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14085313	Remapped	Perfect	NC_000008.11:g.(?_ 40917352)_(4092168 2_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	40,917,352	40,921,682
nssv14085991	Remapped	Perfect	NC_000008.11:g.(?_ 40917352)_(4092168 2_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	40,917,352	40,921,682
nssv14085313	Submitted genomic		NC_000008.10:g.(?_ 40774871)_(4077920 1_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	40,774,871	40,779,201
nssv14085991	Submitted genomic		NC_000008.10:g.(?_ 40774871)_(4077920 1_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	40,774,871	40,779,201

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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