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dbVar

Database of genomic structural variation

nsv3113322

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:4,666

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 367 SVs from 77 studies. See in: genome view

Remapped(Score: Perfect):31,959,679-31,964,344

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3113322	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	31,959,679	31,964,344
nsv3113322	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	32,533,816	32,538,481

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14094464	deletion	sample86	Oligo aCGH	Probe signal intensity	33
nssv14095913	deletion	sample323	Oligo aCGH	Probe signal intensity	63

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14094464	Remapped	Perfect	NC_000013.11:g.(?_ 31959679)_(3196434 4_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	31,959,679	31,964,344
nssv14095913	Remapped	Perfect	NC_000013.11:g.(?_ 31959679)_(3196434 4_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	31,959,679	31,964,344
nssv14094464	Submitted genomic		NC_000013.10:g.(?_ 32533816)_(3253848 1_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	32,533,816	32,538,481
nssv14095913	Submitted genomic		NC_000013.10:g.(?_ 32533816)_(3253848 1_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	32,533,816	32,538,481

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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