nsv3113564
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:158,875
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1384 SVs from 86 studies. See in: genome view
Overlapping variant regions from other studies: 1384 SVs from 86 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3113564 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 49,173,664 | 49,332,538 |
| nsv3113564 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 49,569,590 | 49,728,463 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14102657 | deletion | sample46 | Oligo aCGH | Probe signal intensity | 92 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14102657 | Remapped | Good | NC_000022.11:g.(?_ 49173664)_(4933253 8_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 49,173,664 | 49,332,538 |
| nssv14102657 | Submitted genomic | NC_000022.10:g.(?_ 49569590)_(4972846 3_?)del | GRCh37 (hg19) | NC_000022.10 | Chr22 | 49,569,590 | 49,728,463 |