nsv3114219
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,947
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 166 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 169 SVs from 41 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3114219 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 168,449,180 | 168,454,126 |
| nsv3114219 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 168,418,418 | 168,423,364 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14086708 | deletion | sample206 | Oligo aCGH | Probe signal intensity | 96 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14086708 | Remapped | Perfect | NC_000001.11:g.(?_ 168449180)_(168454 126_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 168,449,180 | 168,454,126 |
| nssv14086708 | Submitted genomic | NC_000001.10:g.(?_ 168418418)_(168423 364_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 168,418,418 | 168,423,364 |