nsv3114563

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:13
Validation:Not tested
Clinical Assertions: No
Region Size:5,813

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 920 SVs from 83 studies. See in: genome view

Remapped(Score: Perfect):32,216,980-32,222,792

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3114563	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nsv3114563	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	32,509,181	32,514,993

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14095941	deletion	sample28	Oligo aCGH	Probe signal intensity	68
nssv14096000	deletion	sample54	Oligo aCGH	Probe signal intensity	86
nssv14096157	deletion	sample146	Oligo aCGH	Probe signal intensity	105
nssv14096218	deletion	sample173	Oligo aCGH	Probe signal intensity	82
nssv14097019	deletion	sample241	Oligo aCGH	Probe signal intensity	59
nssv14097036	deletion	sample253	Oligo aCGH	Probe signal intensity	90
nssv14097045	deletion	sample260	Oligo aCGH	Probe signal intensity	30
nssv14097094	deletion	sample295	Oligo aCGH	Probe signal intensity	77
nssv14097154	deletion	sample334	Oligo aCGH	Probe signal intensity	36
nssv14097208	deletion	sample365	Oligo aCGH	Probe signal intensity	60
nssv14098151	deletion	sample397	Oligo aCGH	Probe signal intensity	112
nssv14098158	deletion	sample403	Oligo aCGH	Probe signal intensity	69
nssv14098196	deletion	sample423	Oligo aCGH	Probe signal intensity	63

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14095941	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14096000	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14096157	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14096218	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097019	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097036	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097045	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097094	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097154	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14097208	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14098151	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14098158	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14098196	Remapped	Perfect	NC_000015.10:g.(?_ 32216980)_(3222279 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,216,980	32,222,792
nssv14095941	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14096000	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14096157	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14096218	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097019	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097036	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097045	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097094	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097154	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14097208	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14098151	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14098158	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993
nssv14098196	Submitted genomic		NC_000015.9:g.(?_3 2509181)_(32514993 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,181	32,514,993

dbVar

Database of genomic structural variation

nsv3114563

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant