nsv3114986
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:218,108
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1311 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 1311 SVs from 85 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3114986 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 189,356,623 | 189,574,730 |
| nsv3114986 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 189,325,753 | 189,543,860 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14107250 | deletion | sample101 | Oligo aCGH | Probe signal intensity | 68 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14107250 | Remapped | Perfect | NC_000001.11:g.(?_ 189356623)_(189574 730_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 189,356,623 | 189,574,730 |
| nssv14107250 | Submitted genomic | NC_000001.10:g.(?_ 189325753)_(189543 860_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 189,325,753 | 189,543,860 |