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dbVar

Database of genomic structural variation

nsv3115244

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:239,281

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3487 SVs from 102 studies. See in: genome view

Remapped(Score: Perfect):11,948,494-12,187,774

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3115244	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	11,948,494	12,187,774
nsv3115244	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	11,948,494	12,187,774

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14087972	deletion	sample274	Oligo aCGH	Probe signal intensity	73
nssv14088890	deletion	sample423	Oligo aCGH	Probe signal intensity	63

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14087972	Remapped	Perfect	NC_000009.12:g.(?_ 11948494)_(1218777 4_?)del	GRCh38.p12	First Pass	NC_000009.12	Chr9	11,948,494	12,187,774
nssv14088890	Remapped	Perfect	NC_000009.12:g.(?_ 11948494)_(1218777 4_?)del	GRCh38.p12	First Pass	NC_000009.12	Chr9	11,948,494	12,187,774
nssv14087972	Submitted genomic		NC_000009.11:g.(?_ 11948494)_(1218777 4_?)del	GRCh37 (hg19)		NC_000009.11	Chr9	11,948,494	12,187,774
nssv14088890	Submitted genomic		NC_000009.11:g.(?_ 11948494)_(1218777 4_?)del	GRCh37 (hg19)		NC_000009.11	Chr9	11,948,494	12,187,774

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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