Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3115782

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:12,303

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1129 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):69,078,591-69,090,893

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3115782	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	69,078,591	69,090,893
nsv3115782	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000018.9	Chr18	66,745,828	66,758,130

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14100138	deletion	sample276	Oligo aCGH	Probe signal intensity	85
nssv14100986	deletion	sample424	Oligo aCGH	Probe signal intensity	70

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14100138	Remapped	Perfect	NC_000018.10:g.(?_ 69078591)_(6909089 3_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	69,078,591	69,090,893
nssv14100986	Remapped	Perfect	NC_000018.10:g.(?_ 69078591)_(6909089 3_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	69,078,591	69,090,893
nssv14100138	Submitted genomic		NC_000018.9:g.(?_6 6745828)_(66758130 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	66,745,828	66,758,130
nssv14100986	Submitted genomic		NC_000018.9:g.(?_6 6745828)_(66758130 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	66,745,828	66,758,130

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI