nsv3116538
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,056
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 219 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 219 SVs from 30 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3116538 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 6,612,542 | 6,616,597 |
| nsv3116538 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 6,672,602 | 6,676,657 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14097220 | deletion | sample353 | Oligo aCGH | Probe signal intensity | 46 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14097220 | Remapped | Perfect | NC_000001.11:g.(?_ 6612542)_(6616597_ ?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 6,612,542 | 6,616,597 |
| nssv14097220 | Submitted genomic | NC_000001.10:g.(?_ 6672602)_(6676657_ ?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 6,672,602 | 6,676,657 |