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dbVar

Database of genomic structural variation

nsv3117469

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:6,168

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 149 SVs from 35 studies. See in: genome view

Remapped(Score: Perfect):33,780,470-33,786,637

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3117469	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	33,780,470	33,786,637
nsv3117469	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	32,107,489	32,113,656

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14098002	deletion	sample36	Oligo aCGH	Probe signal intensity	48
nssv14098909	deletion	sample152	Oligo aCGH	Probe signal intensity	85

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14098002	Remapped	Perfect	NC_000017.11:g.(?_ 33780470)_(3378663 7_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	33,780,470	33,786,637
nssv14098909	Remapped	Perfect	NC_000017.11:g.(?_ 33780470)_(3378663 7_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	33,780,470	33,786,637
nssv14098002	Submitted genomic		NC_000017.10:g.(?_ 32107489)_(3211365 6_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	32,107,489	32,113,656
nssv14098909	Submitted genomic		NC_000017.10:g.(?_ 32107489)_(3211365 6_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	32,107,489	32,113,656

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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