nsv3117905
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,786
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 133 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 133 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3117905 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 105,612,619 | 105,622,404 |
| nsv3117905 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 106,533,776 | 106,543,561 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14107605 | deletion | sample86 | Oligo aCGH | Probe signal intensity | 33 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14107605 | Remapped | Perfect | NC_000004.12:g.(?_ 105612619)_(105622 404_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 105,612,619 | 105,622,404 |
| nssv14107605 | Submitted genomic | NC_000004.11:g.(?_ 106533776)_(106543 561_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 106,533,776 | 106,543,561 |