nsv3118120
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,397
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 710 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 710 SVs from 70 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3118120 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 162,159,131 | 162,165,527 |
| nsv3118120 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 162,580,163 | 162,586,559 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14084528 | deletion | sample107 | Oligo aCGH | Probe signal intensity | 63 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14084528 | Remapped | Perfect | NC_000006.12:g.(?_ 162159131)_(162165 527_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 162,159,131 | 162,165,527 |
| nssv14084528 | Submitted genomic | NC_000006.11:g.(?_ 162580163)_(162586 559_?)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 162,580,163 | 162,586,559 |