nsv3139225
- Organism: Homo sapiens
- Study:nstd151 (Exome Aggregation Consortium CNVs)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,444,587
- Description:qual score = 93
- Publication(s):Exome Aggregation Consortium CNVs
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3487 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 3487 SVs from 89 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3139225 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 113,812,273 | 115,256,859 |
| nsv3139225 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 113,682,995 | 115,127,579 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv14183988 | copy number loss | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14183988 | Remapped | Perfect | NC_000011.10:g.(?_ 113812273)_(115256 859_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 113,812,273 | 115,256,859 |
| nssv14183988 | Submitted genomic | NC_000011.9:g.(?_1 13682995)_(1151275 79_?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 113,682,995 | 115,127,579 |