nsv3164275
- Organism: Homo sapiens
- Study:nstd151 (Exome Aggregation Consortium CNVs)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,174,211
- Description:qual score = 99
- Publication(s):Exome Aggregation Consortium CNVs
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 12177 SVs from 119 studies. See in: genome view
Overlapping variant regions from other studies: 12192 SVs from 119 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3164275 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 43,516,090 | 47,690,300 |
| nsv3164275 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 42,144,730 | 46,319,044 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv14230759 | copy number loss | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14230759 | Remapped | Good | NC_000020.11:g.(?_ 43516090)_(4769030 0_?)del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 43,516,090 | 47,690,300 |
| nssv14230759 | Submitted genomic | NC_000020.10:g.(?_ 42144730)_(4631904 4_?)del | GRCh37 (hg19) | NC_000020.10 | Chr20 | 42,144,730 | 46,319,044 |