Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3168213

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:47,127

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 303 SVs from 43 studies. See in: genome view

Remapped(Score: Perfect):15,202,862-15,249,990

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168213	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	15,202,863 (-1, +1)	15,249,989 (-1, +1)
nsv3168213	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	15,183,509 (-1, +1)	15,230,635 (-1, +1)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239372	deletion	DB105	Sequencing	Paired-end mapping	13

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239372	Remapped	Perfect	NC_000020.11:g.(15 202862_15202864)_( 15249988_15249990) del	GRCh38.p12	First Pass	NC_000020.11	Chr20	15,202,863 (-1, +1)	15,249,989 (-1, +1)
nssv14239372	Submitted genomic		NC_000020.10:g.(15 183508_15183510)_( 15230634_15230636) del	GRCh37 (hg19)		NC_000020.10	Chr20	15,183,509 (-1, +1)	15,230,635 (-1, +1)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI