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dbVar

Database of genomic structural variation

nsv3168524

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:75,399

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1247 SVs from 74 studies. See in: genome view

Remapped(Score: Perfect):162,464,709-162,540,673

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168524	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	162,464,992 (-283, +283)	162,540,390 (-283, +283)
nsv3168524	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	162,886,024 (-283, +283)	162,961,422 (-283, +283)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14238895	deletion	DB55	Sequencing	Paired-end mapping	35

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14238895	Remapped	Perfect	NC_000006.12:g.(16 2464709_162465275) _(162540107_162540 673)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	162,464,992 (-283, +283)	162,540,390 (-283, +283)
nssv14238895	Submitted genomic		NC_000006.11:g.(16 2885741_162886307) _(162961139_162961 705)del	GRCh37 (hg19)		NC_000006.11	Chr6	162,886,024 (-283, +283)	162,961,422 (-283, +283)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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