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dbVar

Database of genomic structural variation

nsv3168652

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:513,482

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1888 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):82,214,297-82,727,784

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168652	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	82,214,300 (-3, +3)	82,727,781 (-3, +3)
nsv3168652	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	82,788,435 (-3, +3)	83,301,916 (-3, +3)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239327	deletion	DB79	Sequencing	Paired-end mapping	61

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239327	Remapped	Perfect	NC_000013.11:g.(82 214297_82214303)_( 82727778_82727784) del	GRCh38.p12	First Pass	NC_000013.11	Chr13	82,214,300 (-3, +3)	82,727,781 (-3, +3)
nssv14239327	Submitted genomic		NC_000013.10:g.(82 788432_82788438)_( 83301913_83301919) del	GRCh37 (hg19)		NC_000013.10	Chr13	82,788,435 (-3, +3)	83,301,916 (-3, +3)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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