Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3168758

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:150,985

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 589 SVs from 74 studies. See in: genome view

Remapped(Score: Perfect):61,445,401-61,596,703

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168758	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	61,445,560 (-159, +159)	61,596,544 (-159, +159)
nsv3168758	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	61,431,234 (-159, +159)	61,582,218 (-159, +159)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239505	duplication	DB45	Sequencing	Paired-end mapping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239505	Remapped	Perfect	NC_000003.12:g.(61 445401_61445719)_( 61596385_61596703) dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	61,445,560 (-159, +159)	61,596,544 (-159, +159)
nssv14239505	Submitted genomic		NC_000003.11:g.(61 431075_61431393)_( 61582059_61582377) dup	GRCh37 (hg19)		NC_000003.11	Chr3	61,431,234 (-159, +159)	61,582,218 (-159, +159)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI