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dbVar

Database of genomic structural variation

nsv3168870

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:150,214

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 489 SVs from 54 studies. See in: genome view

Remapped(Score: Perfect):79,488,791-79,639,172

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3168870	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	79,488,875 (-84, +84)	79,639,088 (-84, +84)
nsv3168870	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	79,954,560 (-84, +84)	80,104,773 (-84, +84)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239476	duplication	DB68	Sequencing	Paired-end mapping	23

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239476	Remapped	Perfect	NC_000001.11:g.(79 488791_79488959)_( 79639004_79639172) dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	79,488,875 (-84, +84)	79,639,088 (-84, +84)
nssv14239476	Submitted genomic		NC_000001.10:g.(79 954476_79954644)_( 80104689_80104857) dup	GRCh37 (hg19)		NC_000001.10	Chr1	79,954,560 (-84, +84)	80,104,773 (-84, +84)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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