nsv3169111
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 397 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 155 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 397 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 155 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3169111 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 18,373,803 (-644, +644) | 18,373,803 (-644, +644) | + |
| nsv3169111 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 2,584,442 (-644, +644) | 2,584,442 (-644, +644) | + |
| nsv3169111 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 18,277,117 (-644, +644) | 18,277,117 (-644, +644) | + | ||
| nsv3169111 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 2,584,440 (-644, +644) | 2,584,440 (-644, +644) | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240314 | interchromosomal translocation | DB104 | Sequencing | Paired-end mapping | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240314 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 18,373,803 (-644, +644) | 18,373,803 (-644, +644) | + |
| nssv14240314 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 2,584,442 (-644, +644) | 2,584,442 (-644, +644) | + |
| nssv14240314 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 18,277,117 (-644, +644) | 18,277,117 (-644, +644) | + | ||
| nssv14240314 | Submitted genomic | GRCh37 (hg19) | NC_000019.9 | Chr19 | 2,584,440 (-644, +644) | 2,584,440 (-644, +644) | + |