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dbVar

Database of genomic structural variation

nsv3169124

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:129,800

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 464 SVs from 54 studies. See in: genome view

Remapped(Score: Perfect):81,696,150-81,825,953

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3169124	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	81,696,152 (-2, +2)	81,825,951 (-2, +2)
nsv3169124	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	81,745,303 (-2, +2)	81,875,102 (-2, +2)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239526	duplication	DB86	Sequencing	Paired-end mapping	12

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239526	Remapped	Perfect	NC_000003.12:g.(81 696150_81696154)_( 81825949_81825953) dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	81,696,152 (-2, +2)	81,825,951 (-2, +2)
nssv14239526	Submitted genomic		NC_000003.11:g.(81 745301_81745305)_( 81875100_81875104) dup	GRCh37 (hg19)		NC_000003.11	Chr3	81,745,303 (-2, +2)	81,875,102 (-2, +2)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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