nsv3169128
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3169128 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 74,060,087 (-605, +605) | 74,060,087 (-605, +605) | + |
| nsv3169128 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 20,197,186 (-605, +605) | 20,197,186 (-605, +605) | + |
| nsv3169128 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 74,769,803 (-605, +605) | 74,769,803 (-605, +605) | + | ||
| nsv3169128 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 20,177,830 (-605, +605) | 20,177,830 (-605, +605) | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240289 | interchromosomal translocation | DB51 | Sequencing | Paired-end mapping | 89 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240289 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 74,060,087 (-605, +605) | 74,060,087 (-605, +605) | + |
| nssv14240289 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 20,197,186 (-605, +605) | 20,197,186 (-605, +605) | + |
| nssv14240289 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 74,769,803 (-605, +605) | 74,769,803 (-605, +605) | + | ||
| nssv14240289 | Submitted genomic | GRCh37 (hg19) | NC_000020.10 | Chr20 | 20,177,830 (-605, +605) | 20,177,830 (-605, +605) | + |