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dbVar

Database of genomic structural variation

nsv3169160

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:55,469

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 430 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):28,607,162-28,662,688

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3169160	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	28,607,191 (-29, +29)	28,662,659 (-29, +29)
nsv3169160	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	28,464,708 (-29, +29)	28,520,176 (-29, +29)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14239259	deletion	DB115	Sequencing	Paired-end mapping	36

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14239259	Remapped	Perfect	NC_000008.11:g.(28 607162_28607220)_( 28662630_28662688) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	28,607,191 (-29, +29)	28,662,659 (-29, +29)
nssv14239259	Submitted genomic		NC_000008.10:g.(28 464679_28464737)_( 28520147_28520205) del	GRCh37 (hg19)		NC_000008.10	Chr8	28,464,708 (-29, +29)	28,520,176 (-29, +29)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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