nsv3169177
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 149 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 127 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 149 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 127 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3169177 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 84,448,755 (-621, +621) | 84,448,755 (-621, +621) | - |
| nsv3169177 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 70,553,709 (-621, +621) | 70,553,709 (-621, +621) | + |
| nsv3169177 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 85,360,990 (-621, +621) | 85,360,990 (-621, +621) | - | ||
| nsv3169177 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 68,549,850 (-621, +621) | 68,549,850 (-621, +621) | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240265 | interchromosomal translocation | DB53 | Sequencing | Paired-end mapping | 125 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240265 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 84,448,755 (-621, +621) | 84,448,755 (-621, +621) | - |
| nssv14240265 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 70,553,709 (-621, +621) | 70,553,709 (-621, +621) | + |
| nssv14240265 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 85,360,990 (-621, +621) | 85,360,990 (-621, +621) | - | ||
| nssv14240265 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 68,549,850 (-621, +621) | 68,549,850 (-621, +621) | + |