nsv3169215
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 236 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 236 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3169215 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 68,089,462 (-1, +1) | 68,089,462 (-1, +1) | + |
| nsv3169215 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 35,885,679 (-1, +1) | 35,885,679 (-1, +1) | + |
| nsv3169215 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 68,663,594 (-1, +1) | 68,663,594 (-1, +1) | + | ||
| nsv3169215 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 36,376,581 (-1, +1) | 36,376,581 (-1, +1) | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240316 | interchromosomal translocation | DB89 | Sequencing | Paired-end mapping | 19 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240316 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 68,089,462 (-1, +1) | 68,089,462 (-1, +1) | + |
| nssv14240316 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 35,885,679 (-1, +1) | 35,885,679 (-1, +1) | + |
| nssv14240316 | Submitted genomic | GRCh37 (hg19) | NC_000013.10 | Chr13 | 68,663,594 (-1, +1) | 68,663,594 (-1, +1) | + | ||
| nssv14240316 | Submitted genomic | GRCh37 (hg19) | NC_000019.9 | Chr19 | 36,376,581 (-1, +1) | 36,376,581 (-1, +1) | + |