nsv3169311
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:58,578
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 387 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 388 SVs from 62 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3169311 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 1,247,978 (-378, +378) | 1,306,555 (-378, +378) |
| nsv3169311 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 1,290,030 (-378, +378) | 1,348,750 (-378, +378) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14239874 | inversion | DB55 | Sequencing | Paired-end mapping | 35 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14239874 | Remapped | Good | NC_000010.11:g.(12 47600_1248356)_(13 06177_1306933)inv1 90 | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 1,247,978 (-378, +378) | 1,306,555 (-378, +378) |
| nssv14239874 | Submitted genomic | NC_000010.10:g.(12 89652_1290408)_(13 48372_1349128)inv1 90 | GRCh37 (hg19) | NC_000010.10 | Chr10 | 1,290,030 (-378, +378) | 1,348,750 (-378, +378) |