nsv3169326
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 103 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 3 SVs from 2 studies. See in: genome view
Overlapping variant regions from other studies: 103 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 3 SVs from 2 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv3169326 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 33,124,357 (-27, +27) | 33,124,357 (-27, +27) | + |
nsv3169326 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_6 | First Pass | NT_167248.2 | Chr6|NT_16 7248.2 | 1,255,999 (-27, +27) | 1,255,999 (-27, +27) | + |
nsv3169326 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 33,520,343 (-27, +27) | 33,520,343 (-27, +27) | + | ||
nsv3169326 | Submitted genomic | GRCh37 (hg19) | ALT_REF_LOCI_6 | NT_167248.1 | Chr6|NT_16 7248.1 | 1,261,595 (-27, +27) | 1,261,595 (-27, +27) | + |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv14240357 | interchromosomal translocation | DB86 | Sequencing | Paired-end mapping | 12 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv14240357 | Remapped | Perfect | GRCh38.p12 | First Pass | NT_167248.2 | Chr6|NT_16 7248.2 | 1,255,999 (-27, +27) | 1,255,999 (-27, +27) | + |
nssv14240357 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 33,124,357 (-27, +27) | 33,124,357 (-27, +27) | + |
nssv14240357 | Submitted genomic | GRCh37 (hg19) | NT_167248.1 | Chr6|NT_16 7248.1 | 1,261,595 (-27, +27) | 1,261,595 (-27, +27) | + | ||
nssv14240357 | Submitted genomic | GRCh37 (hg19) | NC_000022.10 | Chr22 | 33,520,343 (-27, +27) | 33,520,343 (-27, +27) | + |