nsv3170079
- Organism: Homo sapiens
- Study:nstd156 (Fu et al. 2018)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,735
- Publication(s):Fu et al. 2018
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 190 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 190 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 43 SVs from 16 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv3170079 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 53,200,838 | 53,204,794 | 53,214,075 | 53,220,572 |
nsv3170079 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 54,067,005 | 54,070,961 | 54,080,242 | 54,086,739 |
nsv3170079 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 53,761,762 | 53,765,718 | 53,774,999 | 53,781,496 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv14249767 | Remapped | Perfect | NC_000004.12:g.(53 200838_53204794)_( 53214075_53220572) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 53,200,838 | 53,204,794 | 53,214,075 | 53,220,572 |
nssv14251531 | Remapped | Perfect | NC_000004.12:g.(53 200838_53204794)_( 53214075_53220572) dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 53,200,838 | 53,204,794 | 53,214,075 | 53,220,572 |
nssv14249767 | Remapped | Perfect | NC_000004.11:g.(54 067005_54070961)_( 54080242_54086739) del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 54,067,005 | 54,070,961 | 54,080,242 | 54,086,739 |
nssv14251531 | Remapped | Perfect | NC_000004.11:g.(54 067005_54070961)_( 54080242_54086739) dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 54,067,005 | 54,070,961 | 54,080,242 | 54,086,739 |
nssv14249767 | Submitted genomic | NC_000004.10:g.(53 761762_53765718)_( 53774999_53781496) del | NCBI36 (hg18) | NC_000004.10 | Chr4 | 53,761,762 | 53,765,718 | 53,774,999 | 53,781,496 | ||
nssv14251531 | Submitted genomic | NC_000004.10:g.(53 761762_53765718)_( 53774999_53781496) dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 53,761,762 | 53,765,718 | 53,774,999 | 53,781,496 |