nsv3170123
- Organism: Homo sapiens
- Study:nstd156 (Fu et al. 2018)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:112,998
- Publication(s):Fu et al. 2018
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 520 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 520 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 134 SVs from 21 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv3170123 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 18,666,789 | 18,688,534 | 18,771,852 | 18,779,786 |
nsv3170123 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 18,678,111 | 18,699,856 | 18,783,174 | 18,791,108 |
nsv3170123 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 18,585,612 | 18,607,357 | 18,690,675 | 18,698,609 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv14250402 | Remapped | Perfect | NC_000016.10:g.(18 666789_18666790)_( 18715910_18730788) del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 18,666,789 | 18,666,790 | 18,715,910 | 18,730,788 |
nssv14246538 | Remapped | Perfect | NC_000016.10:g.(18 666789_18666790)_( 18759524_18768126) del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 18,666,789 | 18,666,790 | 18,759,524 | 18,768,126 |
nssv14248910 | Remapped | Perfect | NC_000016.10:g.(18 666789_18666790)_( 18771852_18779786) dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 18,666,789 | 18,666,790 | 18,771,852 | 18,779,786 |
nssv14250402 | Remapped | Perfect | NC_000016.9:g.(186 78111_18678112)_(1 8727232_18742110)d el | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 18,678,111 | 18,678,112 | 18,727,232 | 18,742,110 |
nssv14246538 | Remapped | Perfect | NC_000016.9:g.(186 78111_18678112)_(1 8770846_18779448)d el | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 18,678,111 | 18,678,112 | 18,770,846 | 18,779,448 |
nssv14248910 | Remapped | Perfect | NC_000016.9:g.(186 78111_18678112)_(1 8783174_18791108)d up | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 18,678,111 | 18,678,112 | 18,783,174 | 18,791,108 |
nssv14250402 | Submitted genomic | NC_000016.8:g.(185 85612_18585613)_(1 8634733_18649611)d el | NCBI36 (hg18) | NC_000016.8 | Chr16 | 18,585,612 | 18,585,613 | 18,634,733 | 18,649,611 | ||
nssv14246538 | Submitted genomic | NC_000016.8:g.(185 85612_18585613)_(1 8678347_18686949)d el | NCBI36 (hg18) | NC_000016.8 | Chr16 | 18,585,612 | 18,585,613 | 18,678,347 | 18,686,949 | ||
nssv14248910 | Submitted genomic | NC_000016.8:g.(185 85612_18585613)_(1 8690675_18698609)d up | NCBI36 (hg18) | NC_000016.8 | Chr16 | 18,585,612 | 18,585,613 | 18,690,675 | 18,698,609 |