nsv3170159
- Organism: Homo sapiens
- Study:nstd156 (Fu et al. 2018)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:16,894
- Publication(s):Fu et al. 2018
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 245 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 245 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 85 SVs from 24 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv3170159 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 17,488,053 | 17,488,456 | 17,502,521 | 17,504,946 |
nsv3170159 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 17,529,545 | 17,529,948 | 17,544,013 | 17,546,438 |
nsv3170159 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 17,504,549 | 17,504,952 | 17,519,017 | 17,521,442 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv14242444 | Remapped | Perfect | NC_000003.12:g.(17 488053_17488456)_( 17502521_17504946) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 17,488,053 | 17,488,456 | 17,502,521 | 17,504,946 |
nssv14243320 | Remapped | Perfect | NC_000003.12:g.(17 488053_17488456)_( 17502521_17504946) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 17,488,053 | 17,488,456 | 17,502,521 | 17,504,946 |
nssv14247927 | Remapped | Perfect | NC_000003.12:g.(17 488053_17488456)_( 17502521_17504946) dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 17,488,053 | 17,488,456 | 17,502,521 | 17,504,946 |
nssv14242444 | Remapped | Perfect | NC_000003.11:g.(17 529545_17529948)_( 17544013_17546438) del | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 17,529,545 | 17,529,948 | 17,544,013 | 17,546,438 |
nssv14243320 | Remapped | Perfect | NC_000003.11:g.(17 529545_17529948)_( 17544013_17546438) del | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 17,529,545 | 17,529,948 | 17,544,013 | 17,546,438 |
nssv14247927 | Remapped | Perfect | NC_000003.11:g.(17 529545_17529948)_( 17544013_17546438) dup | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 17,529,545 | 17,529,948 | 17,544,013 | 17,546,438 |
nssv14242444 | Submitted genomic | NC_000003.10:g.(17 504549_17504952)_( 17519017_17521442) del | NCBI36 (hg18) | NC_000003.10 | Chr3 | 17,504,549 | 17,504,952 | 17,519,017 | 17,521,442 | ||
nssv14243320 | Submitted genomic | NC_000003.10:g.(17 504549_17504952)_( 17519017_17521442) del | NCBI36 (hg18) | NC_000003.10 | Chr3 | 17,504,549 | 17,504,952 | 17,519,017 | 17,521,442 | ||
nssv14247927 | Submitted genomic | NC_000003.10:g.(17 504549_17504952)_( 17519017_17521442) dup | NCBI36 (hg18) | NC_000003.10 | Chr3 | 17,504,549 | 17,504,952 | 17,519,017 | 17,521,442 |